Genozip: A fast and efficient compression tool for VCF files

Divon Lan; Raymond Tobler; Yassine Souilmi; Bastien Llamas

doi:10.1093/bioinformatics/btaa290

Genozip: A fast and efficient compression tool for VCF files

Divon Lan, Raymond Tobler, Yassine Souilmi, Bastien Llamas

Research output: Contribution to journal › Article

Abstract

Motivation: genozip is a new lossless compression tool for Variant Call Format (VCF) files. By applying field-specific algorithms and fully utilizing the available computational hardware, genozip achieves the highest compression ratios amongst existing lossless compression tools known to the authors, at speeds comparable with the fastest multi-threaded compressors.

Original language	English
Pages (from-to)	4091-4092
Journal	Bioinformatics
Volume	36
Issue number	13
DOIs	https://doi.org/10.1093/bioinformatics/btaa290
Publication status	Published - 2020

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10.1093/bioinformatics/btaa290

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abstract = "Motivation: genozip is a new lossless compression tool for Variant Call Format (VCF) files. By applying field-specific algorithms and fully utilizing the available computational hardware, genozip achieves the highest compression ratios amongst existing lossless compression tools known to the authors, at speeds comparable with the fastest multi-threaded compressors.",

author = "Divon Lan and Raymond Tobler and Yassine Souilmi and Bastien Llamas",

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AB - Motivation: genozip is a new lossless compression tool for Variant Call Format (VCF) files. By applying field-specific algorithms and fully utilizing the available computational hardware, genozip achieves the highest compression ratios amongst existing lossless compression tools known to the authors, at speeds comparable with the fastest multi-threaded compressors.

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DO - 10.1093/bioinformatics/btaa290

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Genozip: A fast and efficient compression tool for VCF files

Abstract

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